Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NELFA

Cell type

Cell type Class
Breast
Cell type
Breast cells
NA
NA

Attributes by original data submitter

Sample

source_name
Normal breast tissue, unsorted, non-carrier, NELF-A ChIP
genotype/variation
Non-Carrier
tissue
Normal breast
sorted cell type
Unsorted
antibody
anti-NELF-A
individual identifier
BSC132

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
33177373
Reads aligned (%)
99.9
Duplicates removed (%)
26.4
Number of peaks
243 (qval < 1E-05)

hg19

Number of total reads
33177373
Reads aligned (%)
99.9
Duplicates removed (%)
26.6
Number of peaks
290 (qval < 1E-05)

Base call quality data from DBCLS SRA