Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Neural

Cell type

Prefrontal Cortex

MeSH Description

The rostral part of the frontal lobe, bounded by the inferior precentral fissure in humans, which receives projection fibers from the MEDIODORSAL NUCLEUS OF THE THALAMUS. The prefrontal cortex receives afferent fibers from numerous structures of the DIENCEPHALON; MESENCEPHALON; and LIMBIC SYSTEM as well as cortical afferents of visual, auditory, and somatic origin.

Sample

source_name

Brodmann area 10

cell type

Frozen brain tissue

line

--

Sex

male

age

31

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

DNA was purified using Qiagen Qiaquick PCR purification kit, assayed for quality by Bioanalyzer (Agilent), and quantified using a Qubit Fluorometer according to the manufacturer’s instructions. Libraries were prepared using previously published methods (PMID: 25662462)

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

56371360

Reads aligned (%)

98.0

Duplicates removed (%)

10.7

Number of peaks

1844 (qval < 1E-05)

hg19

Number of total reads

56371360

Reads aligned (%)

96.9

Duplicates removed (%)

12.2

Number of peaks

1374 (qval < 1E-05)