Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Neural
Cell type
Bipolar spindle neurons
NA
NA

Attributes by original data submitter

Sample

age
53 year
donor ID
ENCDO336AAA
dev stage
adult
sample type
in vitro differentiated cells
cell type
bipolar spindle neuron
sex
male
lab
Thomas Gingeras, CSHL

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
34099085
Reads aligned (%)
95.0
Duplicates removed (%)
6.4
Number of peaks
57532 (qval < 1E-05)

hg19

Number of total reads
34099085
Reads aligned (%)
94.5
Duplicates removed (%)
6.5
Number of peaks
57477 (qval < 1E-05)

Base call quality data from DBCLS SRA