Antigen

Antigen Class

Histone

Antigen

H3K4me1

Cell type

Cell type Class

Others

Cell type

Adrenal Glands

MeSH Description

A pair of glands located at the cranial pole of each of the two KIDNEYS. Each adrenal gland is composed of two distinct endocrine tissues with separate embryonic origins, the ADRENAL CORTEX producing STEROIDS and the ADRENAL MEDULLA producing NEUROTRANSMITTERS.

Sample

dev stage

adult

sex

male

sample type

tissue

donor ID

ENCDO451RUA

age

54 year

lab

Bradley Bernstein, Broad

tissue

adrenal gland

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

general protocol: https://www.encodeproject.org/documents/be2a0f12-af38-430c-8f2d-57953baab5f5/@@download/attachment/Epigenomics_Alternative_Mag_Bead_ChIP_Protocol_v1.1_exp.pdf

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

40799035

Reads aligned (%)

98.7

Duplicates removed (%)

5.6

Number of peaks

1140 (qval < 1E-05)

hg19

Number of total reads

40799035

Reads aligned (%)

97.7

Duplicates removed (%)

7.0

Number of peaks

993 (qval < 1E-05)