Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Pluripotent stem cell

Cell type

hESC H1

NA

NA

Sample

dev stage

embryonic

cell type

H1-hESC

sex

male

sample type

stem cell

donor ID

ENCDO000AAW

age

unknown

health state

healthy

lab

Bradley Bernstein, Broad

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

extraction method: see document general protocol: https://www.encodeproject.org/documents/f10bdd36-e370-4777-a7f3-83091c115749/@@download/attachment/wgEncodeBroadHistone.html.pdf

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

46790644

Reads aligned (%)

98.0

Duplicates removed (%)

4.2

Number of peaks

1102 (qval < 1E-05)

hg19

Number of total reads

46790644

Reads aligned (%)

97.2

Duplicates removed (%)

5.4

Number of peaks

1165 (qval < 1E-05)