SRX262228
GSM1117988: H3K27me3 MB ChIP-seq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
C2C12 myoblasts
cell line
C2C12 cell-line
cell type
Myoblast (MB)
chip antibody
H3K27me3
chip antibody manufacturer
Millipore

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
26472358
Reads aligned (%)
95.2
Duplicates removed (%)
6.7
Number of peaks
246 (qval < 1E-05)

mm9

Number of total reads
26472358
Reads aligned (%)
95.1
Duplicates removed (%)
6.8
Number of peaks
271 (qval < 1E-05)

Base call quality data from DBCLS SRA