Curated Sample Data


Genome
dm3
Antigen Class
Input control
Antigen
Input control
Cell type Class
Cell line
Cell type
S2

Cell type information


Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by Original Data Submitter


source_name
Endogenous BRM Input
cell line
S2 cells
chip antibody
Monoclonal against Drosophila BRM (non-commercial)

Metadata from Sequence Read Archive

Library Description


library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Input DNA was isolated with the ChIP cleanup and concentrator Kit (Zymo Research) Input DNA and immunoprecipitated DNA samples were used for Rubicon Thruplex-FD library preparation and sequenced in a Illumina HiSeq2500 instrument

Platform Information


instrument_model
Illumina HiSeq 2500

External Database Query

Logs in read processing pipeline


Number of total reads
22211482
Reads aligned (%)
97.4
Duplicates removed (%)
13.4
Number of peaks
3297 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA