GSM2498495: Input knockdown KDM4A ChIP KDM4A; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Input control
Antigen
Input control
Cell type
Cell type Class
Breast
Cell type
BCSC1
NA
NA
Attributes by original data submitter
Sample
source_name
Input_knockdown KDM4A_ChIP_KDM4A
cell line
breast triple negative tumor cell line BCSC1
treatment
shRNA KDM4A
chip antibody
none
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Metzger, E., et al. Phosphorylation of histone H3 at threonine 11 establishes a novel chromatin mark for transcriptional regulation. Nat Cell Biol 10, 53-60 (2008), Drosophila Spike in Chromatin was added in H3K9me3 control and H3K9me3 (i) samples. Libraries were prepared from immunoprecipitated DNA according to standard methods. ChIP-seq libraries were sequenced using a HiSeq 2000 (Illumina) and mapped to the hg19 reference genome using bowtie 2