Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Neural

Cell type

KELLY

Primary Tissue

Brain

Tissue Diagnosis

Neuroblastoma

Sample

source_name

Neuroblastoma

cell type

Kelly

Sequenced DNA Library

library_strategy

ATAC-seq

library_source

GENOMIC

library_selection

other

library_construction_protocol

Libraries were generated using the Ad1 and Ad2.13–2.24 barcoded primers from and were amplified for 7–9 total cycles DNA was simultaneously fragmented and tagged with sequencing adapters using the Nextera Tn5 transpoase kit

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

31257585

Reads aligned (%)

12.3

Duplicates removed (%)

40.4

Number of peaks

1739 (qval < 1E-05)

hg19

Number of total reads

31257585

Reads aligned (%)

12.2

Duplicates removed (%)

40.4

Number of peaks

1762 (qval < 1E-05)