Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Embryonic fibroblast
Cell type
MEF
Tissue
Embryonic Fibroblast
Lineage
primaryCells
Description
Mouse Embryonic Fibroblast

Attributes by original data submitter

Sample

source_name
Pol2_SRSF2ko
cell type
MEF cell line
passages
2~10
chip antibody
SC-899
molecule type
genomic DNA

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
29779066
Reads aligned (%)
25.2
Duplicates removed (%)
9.6
Number of peaks
16227 (qval < 1E-05)

mm9

Number of total reads
29779066
Reads aligned (%)
25.2
Duplicates removed (%)
9.8
Number of peaks
16252 (qval < 1E-05)

Base call quality data from DBCLS SRA