SRX255456
GSM1106075: SRSF2 HA tag ChIP-seq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Epitope tags

Cell type

Cell type Class
Embryonic fibroblast
Cell type
MEF
Tissue
Embryonic Fibroblast
Lineage
primaryCells
Description
Mouse Embryonic Fibroblast

Attributes by original data submitter

Sample

source_name
SRSF2_HA_ChIP
cell type
MEF cell line
passages
2~10
chip antibody
anti-HA (ab9110)
molecule type
genomic DNA

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
16028167
Reads aligned (%)
35.6
Duplicates removed (%)
2.2
Number of peaks
1527 (qval < 1E-05)

mm9

Number of total reads
16028167
Reads aligned (%)
35.5
Duplicates removed (%)
2.3
Number of peaks
1540 (qval < 1E-05)

Base call quality data from DBCLS SRA