Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Yeast strain
Cell type
HHY168
NA
NA

Attributes by original data submitter

Sample

source_name
Saccharomyces cerevisiae_HHY168
strain
HHY168

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
as described in Fan, X., Lamarre-Vincent, N., Wang, Q., and Struhl, K. (2008). Extensive chromatin fragmentation improves enrichment of protein binding sites in chromatin immunoprecipitation experiments. Nucl. Acids Res. 36, e125. as described in Wong, K.-H., Jin, Y., and Moqtaderi, Z. (2013). Multiplex Illumina sequencing using DNA barcoding. Curr Protoc Mol Biol Chapter 7, Unit 7.11.

Sequencing Platform

instrument_model
Illumina MiSeq

sacCer3

Number of total reads
6943480
Reads aligned (%)
79.8
Duplicates removed (%)
86.1
Number of peaks
535 (qval < 1E-05)

Base call quality data from DBCLS SRA