SRX248936
GSM1097885: CD34 LMO2 ChIP-seq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
LMO2

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

source_name
CD34+ cells
chip antibody
LMO2 (R&D, AF2726), VHX0111051
cell type
CD34+ cells

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
25467874
Reads aligned (%)
98.5
Duplicates removed (%)
22.1
Number of peaks
646 (qval < 1E-05)

hg19

Number of total reads
25467874
Reads aligned (%)
97.7
Duplicates removed (%)
23.4
Number of peaks
840 (qval < 1E-05)

Base call quality data from DBCLS SRA