Antigen

Antigen Class

TFs and others

Antigen

Ctcf

Cell type

Cell type Class

Blood

Cell type

B cells

NA

NA

Sample

source_name

splenic B cells

chip antibody

CTCF

chip antibody manufacturer

Millipore

cell type

splenic B cells

strain

C57BL/6

cell surface markers

CD43-

cell isolation

B cells were purified from the spleens of 6-week old mice using a magnetic bead based CD43- B cell Isolation Kit (Miltenyi).

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

39778767

Reads aligned (%)

69.4

Duplicates removed (%)

51.9

Number of peaks

34561 (qval < 1E-05)

mm9

Number of total reads

39778767

Reads aligned (%)

69.1

Duplicates removed (%)

52.0

Number of peaks

34584 (qval < 1E-05)