Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Epidermis

Cell type

Skin epithelia

NA

NA

Sample

source_name

Skin

Sex

female

strain

C57BL/6

cell type

adult skin epithelia

sort markers

Integrin A6+, B1+ SCa1+ CD34-

treatment

topical imiquimod for 6 days

Sequenced DNA Library

library_strategy

ATAC-seq

library_source

GENOMIC

library_selection

other

library_construction_protocol

Cells were FACS sorted according to characteristics: sort markers, and Nuclei were extracted and genomic DNA was transposed per protocl outlined in doi:10.1038/nmeth.2690 Nextera DNA Library Preparation Kit

Sequencing Platform

instrument_model

Illumina HiSeq 4000

mm10

Number of total reads

49492241

Reads aligned (%)

94.7

Duplicates removed (%)

29.2

Number of peaks

98843 (qval < 1E-05)

mm9

Number of total reads

49492241

Reads aligned (%)

94.6

Duplicates removed (%)

29.3

Number of peaks

98774 (qval < 1E-05)