Antigen

Antigen Class

TFs and others

Antigen

Ctcf

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

dev stage

postnatal

donor ID

ENCDO956IXV

tissue

liver

age

0 day

sex

not collected

lab

Richard Myers, HAIB

sample type

tissue

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

growth protocol: https://www.encodeproject.org/documents/e22e9796-e93c-4c7e-b591-a0eb87db5a36/@@download/attachment/MyersLab_Tissue_ChIP_11_6_14.pdf

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

21859753

Reads aligned (%)

97.9

Duplicates removed (%)

19.1

Number of peaks

43537 (qval < 1E-05)

mm9

Number of total reads

21859753

Reads aligned (%)

97.6

Duplicates removed (%)

19.2

Number of peaks

43530 (qval < 1E-05)