Antigen

Antigen Class

TFs and others

Antigen

NFE2L2

Cell type

Cell type Class

Uterus

Cell type

HeLa

Primary Tissue

Cervix

Tissue Diagnosis

Adenocarcinoma

Sample

dev stage

adult

cell line

HeLa-S3

sex

female

sample type

immortalized cell line

donor ID

ENCDO000AAB

age

31 year

health state

cervical adenocarcinoma

lab

Michael Snyder, Stanford

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

general protocol: https://www.encodeproject.org/documents/2abad4f0-cd36-43de-8cd8-9958aa7fde39/@@download/attachment/ChIP-Seq_protocol_Snyder_lab_GAIIx.pdf

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

hg38

Number of total reads

25392714

Reads aligned (%)

97.7

Duplicates removed (%)

5.0

Number of peaks

5914 (qval < 1E-05)

hg19

Number of total reads

25392714

Reads aligned (%)

96.8

Duplicates removed (%)

6.6

Number of peaks

5906 (qval < 1E-05)