Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HINFP

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

dev stage
adult
donor ID
ENCDO000AAD
age
53 year
sex
female
passage number
5
lab
Kevin White, UChicago
health state
chronic myelogenous leukemia (CML)
sample type
immortalized cell line
cell line
K562

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
23968772
Reads aligned (%)
98.6
Duplicates removed (%)
3.4
Number of peaks
2681 (qval < 1E-05)

hg19

Number of total reads
23968772
Reads aligned (%)
97.8
Duplicates removed (%)
3.7
Number of peaks
2217 (qval < 1E-05)

Base call quality data from DBCLS SRA