Antigen

Antigen Class

TFs and others

Antigen

Ctcf

Cell type

Cell type Class

Cardiovascular

Cell type

Heart

MeSH Description

The hollow, muscular organ that maintains the circulation of the blood.

Sample

dev stage

postnatal

donor ID

ENCDO956IXV

tissue

heart

age

0 day

sex

not collected

lab

Richard Myers, HAIB

sample type

tissue

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

general protocol: https://www.encodeproject.org/documents/6ecd8240-a351-479b-9de6-f09ca3702ac3/@@download/attachment/ChIP-seq_Protocol_v011014.pdf general protocol: https://www.encodeproject.org/documents/6ecd8240-a351-479b-9de6-f09ca3702ac3/@@download/attachment/ChIP-seq_Protocol_v011014.pdf

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

23430720

Reads aligned (%)

98.6

Duplicates removed (%)

10.4

Number of peaks

34305 (qval < 1E-05)

mm9

Number of total reads

23430720

Reads aligned (%)

98.5

Duplicates removed (%)

10.5

Number of peaks

34271 (qval < 1E-05)