SRX2420067
GSM2427871: LEU B.H3K18ac.R2; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K18ac

Cell type

Cell type Class
Blood
Cell type
B-cell lymphoproliferative disorders
NA
NA

Attributes by original data submitter

Sample

source_name
LPD bulk tissue
strain
C57BL/6
genotype
Crebbp-/- (CBPfl/fl:Mx-Cre+)
cell type
LPD bulk tissue
chip antibody
anti-H3K18ac #ab1191, Abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Bulk splenocytes ChIP-Seq libraries were prepared for sequencing using standard Illumina protocols

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
45282584
Reads aligned (%)
96.0
Duplicates removed (%)
10.5
Number of peaks
23552 (qval < 1E-05)

mm9

Number of total reads
45282584
Reads aligned (%)
95.9
Duplicates removed (%)
10.6
Number of peaks
23529 (qval < 1E-05)

Base call quality data from DBCLS SRA