Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K18ac

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
B220+ B cells
strain
C57BL/6
genotype
Wild type (CBPfl/fl:Mx-Cre-)
cell type
B220+ B cells
chip antibody
anti-H3K18ac #ab1191, Abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
FACS of B220+ splenocytes ChIP-Seq libraries were prepared for sequencing using standard Illumina protocols

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
41118963
Reads aligned (%)
91.2
Duplicates removed (%)
37.7
Number of peaks
13137 (qval < 1E-05)

mm9

Number of total reads
41118963
Reads aligned (%)
90.9
Duplicates removed (%)
37.8
Number of peaks
13155 (qval < 1E-05)

Base call quality data from DBCLS SRA