SRX237290
GSM1082934: SRCAP IL2aCD3aCD28 ChIPseq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SRCAP

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells activated by IL-2+aCD3+aCD28
cell type
CD4+ T cells
chip antibody
SRCAP (Abcam, ab99408, lot GR58857-1)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
186580887
Reads aligned (%)
95.3
Duplicates removed (%)
90.8
Number of peaks
2511 (qval < 1E-05)

hg19

Number of total reads
186580887
Reads aligned (%)
94.2
Duplicates removed (%)
92.7
Number of peaks
2335 (qval < 1E-05)

Base call quality data from DBCLS SRA