Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Breast
Cell type
Mammary glands
NA
NA

Attributes by original data submitter

Sample

source_name
FACS-sorted cells from mouse mammary gland
sample
2
subpopulation
Lgr5+Tspan8hi
tissue
Mammary gland
antibody
H3K27me3
antibody vendor/catalog
Millipore #07-449
genetic background
C57BL/6

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
18835111
Reads aligned (%)
94.8
Duplicates removed (%)
45.4
Number of peaks
81 (qval < 1E-05)

mm9

Number of total reads
18835111
Reads aligned (%)
94.6
Duplicates removed (%)
45.4
Number of peaks
62 (qval < 1E-05)

Base call quality data from DBCLS SRA