SRX2324502
GSM2374743: H3K4me3 RS WT rep2; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Gonad
Cell type
Round spermatids
NA
NA

Attributes by original data submitter

Sample

source_name
Round spermatides
strain
C57BL/6
tissue
testis
age
adult
genotype
wild type
biowardrobe ides
3204

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
none provided by the submitter none provided by the submitter

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
9108038
Reads aligned (%)
80.9
Duplicates removed (%)
6.9
Number of peaks
14110 (qval < 1E-05)

mm9

Number of total reads
9108038
Reads aligned (%)
80.8
Duplicates removed (%)
6.9
Number of peaks
14171 (qval < 1E-05)

Base call quality data from DBCLS SRA