SRX2324490
GSM2374731: H3K4me2 RS WT rep1; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Gonad
Cell type
Round spermatids
NA
NA

Attributes by original data submitter

Sample

source_name
Round spermatides
strain
C57BL/6
tissue
testis
age
adult
genotype
wild type
biowardrobe ides
3387

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
none provided by the submitter none provided by the submitter

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
38646842
Reads aligned (%)
98.3
Duplicates removed (%)
13.3
Number of peaks
544 (qval < 1E-05)

mm9

Number of total reads
38646842
Reads aligned (%)
98.0
Duplicates removed (%)
13.3
Number of peaks
558 (qval < 1E-05)

Base call quality data from DBCLS SRA