Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Zfp384

Cell type

Cell type Class
Gonad
Cell type
Spermatogonia
MeSH Description
Euploid male germ cells of an early stage of SPERMATOGENESIS, derived from prespermatogonia. With the onset of puberty, spermatogonia at the basement membrane of the seminiferous tubule proliferate by mitotic then meiotic divisions and give rise to the haploid SPERMATOCYTES.

Attributes by original data submitter

Sample

source_name
Thy1+ spermatogonia
strain
C57BL/6
tissue
testis
age
P7
genotype
wild type
biowardrobe ides
3156

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
none provided by the submitter none provided by the submitter

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
22199573
Reads aligned (%)
80.8
Duplicates removed (%)
6.6
Number of peaks
18619 (qval < 1E-05)

mm9

Number of total reads
22199573
Reads aligned (%)
80.7
Duplicates removed (%)
6.6
Number of peaks
18599 (qval < 1E-05)

Base call quality data from DBCLS SRA