SRX2324480
GSM2374721: H3K27me3 RS Scml2KO rep1; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Gonad
Cell type
Round spermatids
NA
NA

Attributes by original data submitter

Sample

source_name
Round spermatides
strain
C57BL/6
tissue
testis
age
adult
genotype
Scml2-KO
biowardrobe ides
2406

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
none provided by the submitter none provided by the submitter

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
42841034
Reads aligned (%)
87.5
Duplicates removed (%)
16.8
Number of peaks
834 (qval < 1E-05)

mm9

Number of total reads
42841034
Reads aligned (%)
87.3
Duplicates removed (%)
16.8
Number of peaks
825 (qval < 1E-05)

Base call quality data from DBCLS SRA