Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Was

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
WT spleen CD4+ T cells sample
cell type
spleen CD4+ T cells
tissue
spleen
strain
C57BL/6
chip antibody
WASp F-8 (Santa Cruz)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
14018814
Reads aligned (%)
99.5
Duplicates removed (%)
2.7
Number of peaks
255 (qval < 1E-05)

mm9

Number of total reads
14018814
Reads aligned (%)
99.4
Duplicates removed (%)
2.7
Number of peaks
258 (qval < 1E-05)

Base call quality data from DBCLS SRA