Antigen

Antigen Class

Histone

Antigen

H3K27ac

Cell type

Cell type Class

Digestive tract

Cell type

TE-6

Primary Tissue

Esophagus

Tissue Diagnosis

Carcinoma

Sample

source_name

Cancer cell line

tumor type

Esophageal carcinomas

cell line

TE6

antibody

H3K27ac, Abcam, ab4729

treatment

NA

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Chromatin-IP Following NEB ChIP-seq library preparation kit (E6200S)

Sequencing Platform

instrument_model

Illumina MiSeq

hg38

Number of total reads

6514796

Reads aligned (%)

99.4

Duplicates removed (%)

2.1

Number of peaks

474 (qval < 1E-05)

hg19

Number of total reads

6514796

Reads aligned (%)

99.2

Duplicates removed (%)

2.3

Number of peaks

514 (qval < 1E-05)