Antigen

Antigen Class

Histone

Antigen

H3K27ac

Cell type

Cell type Class

Others

Cell type

Detroit 562

Primary Tissue

Nasal Pharynx

Tissue Diagnosis

Carcinoma

Sample

source_name

Cancer cell line

tumor type

Head and neck squamous cell carcinomas

cell line

Detroit562

antibody

H3K27ac, Abcam, ab4729

treatment

NA

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Chromatin-IP Following NEB ChIP-seq library preparation kit (E6200S)

Sequencing Platform

instrument_model

Illumina MiSeq

hg38

Number of total reads

4549488

Reads aligned (%)

99.6

Duplicates removed (%)

1.7

Number of peaks

8934 (qval < 1E-05)

hg19

Number of total reads

4549488

Reads aligned (%)

99.5

Duplicates removed (%)

1.8

Number of peaks

8951 (qval < 1E-05)