Antigen

Antigen Class

TFs and others

Antigen

BRD4

Cell type

Cell type Class

Prostate

Cell type

C4-2

Tissue

Prostate

Cell Type

Epithelial

Disease

Prostate Cancer

Sample

source_name

Prostate cells

cell line

C4-2

treatment

JQ1

chip antibody

BRD4 (BETHYL,A301-985A100)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP DNAs were extracted as as described previously (PMID: 27068475). Libraries were prepared according to Illumina's instructions accompanying the ChIP-seq Sample Kit.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

27727147

Reads aligned (%)

97.7

Duplicates removed (%)

0.9

Number of peaks

20338 (qval < 1E-05)

hg19

Number of total reads

27727147

Reads aligned (%)

97.1

Duplicates removed (%)

1.0

Number of peaks

20211 (qval < 1E-05)