Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Neural
Cell type
GSC8
NA
NA

Attributes by original data submitter

Sample

source_name
H3K27me3_GSC8_4d-GSKJ4
cell line
Patient-derived neurosphere line GSC8
drug treatment
4 day 1.5 µM GSKJ4
chip-antibody
H3K27me3 (Millipore, 07-449, lot 2382150)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
17932999
Reads aligned (%)
98.2
Duplicates removed (%)
0.0
Number of peaks
133 (qval < 1E-05)

hg19

Number of total reads
17932999
Reads aligned (%)
98.1
Duplicates removed (%)
0.0
Number of peaks
164 (qval < 1E-05)

Base call quality data from DBCLS SRA