Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TCF4

Cell type

Cell type Class
Blood
Cell type
CAL-1
NA
NA

Attributes by original data submitter

Sample

source_name
CAL-1 cell line
cell line
CAL-1
antibody
E2-2 Ab is a rabbit monoclonal Ab generated in Dr. Louis Staudt's lab

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
32331118
Reads aligned (%)
45.7
Duplicates removed (%)
5.6
Number of peaks
7468 (qval < 1E-05)

hg38

Number of total reads
32331118
Reads aligned (%)
46.7
Duplicates removed (%)
4.3
Number of peaks
7574 (qval < 1E-05)

Base call quality data from DBCLS SRA