SRX218290
GSM1066046: resting IgG CHIP-seq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD43- B cells extracted from spleen
strain
C57BL/6
chip antibody
Rabbit IgG (Bethyl, ref: P120-101 lot: P120-101-8)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
35295173
Reads aligned (%)
87.2
Duplicates removed (%)
15.7
Number of peaks
604 (qval < 1E-05)

mm9

Number of total reads
35295173
Reads aligned (%)
87.0
Duplicates removed (%)
15.7
Number of peaks
681 (qval < 1E-05)

Base call quality data from DBCLS SRA