SRX218220
GSM1065714: HSF1 heat-treated cycling K562; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HSF1

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562 cells
cell line
K562 cells
cell cycle phase
freely cycling
treatment
30 min at 42C
chip antibody
HSF1 (SPA-901, Enzo, Lot#09011025)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
31624482
Reads aligned (%)
95.9
Duplicates removed (%)
44.9
Number of peaks
1122 (qval < 1E-05)

hg38

Number of total reads
31624482
Reads aligned (%)
96.7
Duplicates removed (%)
43.1
Number of peaks
823 (qval < 1E-05)

Base call quality data from DBCLS SRA