Antigen

Antigen Class

TFs and others

Antigen

Brca1

Cell type

Cell type Class

Blood

Cell type

B cells

NA

NA

Sample

source_name

Splenic B Cells

ChIP

Brca1

cell type

In vitro activated B Cells

strain

129/Sv x C57BL/6

genotype

wildtype

growth duration

72 hr

chip antibody

mouse monoclonal raised against mouse BRCA1 (160-300 amino acids)

treatment protocol

0 mM hydroxyurea for 6 hrs

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

16599028

Reads aligned (%)

95.6

Duplicates removed (%)

22.7

Number of peaks

306 (qval < 1E-05)

mm9

Number of total reads

16599028

Reads aligned (%)

95.5

Duplicates removed (%)

22.8

Number of peaks

318 (qval < 1E-05)