Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Irf4

Cell type

Cell type Class
Blood
Cell type
Pre-B cells
NA
NA

Attributes by original data submitter

Sample

source_name
stromal adherent IKDN pre-B cell progenitors derived from IKDN CD2 Cre mice
cell type
stromal adherent pre-B cell progenitors
genotype
IKDN CD2 Cre
passages
3 to 8
antibody
Santa Cruz Biotech/sc-6059x

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
28279377
Reads aligned (%)
96.9
Duplicates removed (%)
11.9
Number of peaks
69976 (qval < 1E-05)

mm9

Number of total reads
28279377
Reads aligned (%)
96.6
Duplicates removed (%)
11.9
Number of peaks
69794 (qval < 1E-05)

Base call quality data from DBCLS SRA