Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Larvae
Cell type
Eye discs
NA
NA

Attributes by original data submitter

Sample

source_name
Eye imaginal discs
genotype
wt
genetic background
Canton S
tissue
eye imaginal discs
developmental stage
third instar larvae
chip antibody
anti-H3K4me3 (Millipore-Upstate/07-473)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm6

Number of total reads
50624300
Reads aligned (%)
58.2
Duplicates removed (%)
60.6
Number of peaks
7427 (qval < 1E-05)

dm3

Number of total reads
50624300
Reads aligned (%)
58.5
Duplicates removed (%)
59.1
Number of peaks
7231 (qval < 1E-05)

Base call quality data from DBCLS SRA