Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

MOLECULE

genomic DNA

DISEASE

coronary artery disease

BIOMATERIAL_PROVIDER

Shin Lin, Stanford University

BIOMATERIAL_TYPE

Primary Tissue

TISSUE_TYPE

Liver

TISSUE_DEPOT

N/A

COLLECTION_METHOD

Autopsy

DONOR_ID

STL011

DONOR_AGE

32

DONOR_HEALTH_STATUS

coronary artery disease. No history of hypertension or diabetes.

DONOR_SEX

Male

DONOR_ETHNICITY

Caucasian

sample_term_id

UBERON_0002107

Sequenced DNA Library

library_name

CY127

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

34624516

Reads aligned (%)

97.2

Duplicates removed (%)

29.3

Number of peaks

738 (qval < 1E-05)

hg19

Number of total reads

34624516

Reads aligned (%)

96.7

Duplicates removed (%)

30.2

Number of peaks

771 (qval < 1E-05)