SRX213551
CDK9 ChIPseq from siFUS treated HEK293T/17 cells

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

cell-line
HEK293T/17

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
142948245
Reads aligned (%)
66.0
Duplicates removed (%)
92.5
Number of peaks
1492 (qval < 1E-05)

hg19

Number of total reads
142948245
Reads aligned (%)
65.5
Duplicates removed (%)
93.8
Number of peaks
1407 (qval < 1E-05)

Base call quality data from DBCLS SRA