Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Breast
Cell type
Mammary glands
NA
NA

Attributes by original data submitter

Sample

source_name
mammary gland
cell type
Luminal progenitor cells
state
virgin
chip antibody
Histone H3 trimethyl Lys27
strain
FVB/N
chip antibody manufacturer
Millipore

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
20615245
Reads aligned (%)
98.6
Duplicates removed (%)
8.0
Number of peaks
422 (qval < 1E-05)

mm9

Number of total reads
20615245
Reads aligned (%)
98.5
Duplicates removed (%)
8.5
Number of peaks
438 (qval < 1E-05)

Base call quality data from DBCLS SRA