SRX212470
GSM1056913: H2AZ-ChIP-Seq Control 2; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H2A.Z

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
EBV-Transformed peripheral blood B lymphocytes
genotype/variation
normal control
cell type
EBV-Transformed B lymphocytes
tissue
whole blood
chip antibody
H2A.Z (Abcam Plc., ab4174)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
25773648
Reads aligned (%)
58.8
Duplicates removed (%)
38.2
Number of peaks
391 (qval < 1E-05)

hg19

Number of total reads
25773648
Reads aligned (%)
58.3
Duplicates removed (%)
39.0
Number of peaks
492 (qval < 1E-05)

Base call quality data from DBCLS SRA