SRX212169
GSM1055775: H3K79me2 HL60; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K79me2

Cell type

Cell type Class
Blood
Cell type
HL-60
Primary Tissue
Blood
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

GEO Accession
GSM1055775
chip antibody
H3K79me2
disease state
MLL wildtype human AML
cell line
HL60

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
26183559
Reads aligned (%)
93.4
Duplicates removed (%)
6.2
Number of peaks
6291 (qval < 1E-05)

hg19

Number of total reads
26183559
Reads aligned (%)
93.2
Duplicates removed (%)
6.3
Number of peaks
6351 (qval < 1E-05)

Base call quality data from DBCLS SRA