SRX212164
GSM1055770: H3K79me2 MLL-AF6 rep1; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K79me2

Cell type

Cell type Class
Blood
Cell type
Leukemic bone marrow cells
NA
NA

Attributes by original data submitter

Sample

GEO Accession
GSM1055770
background strain
B6/129 (Taconic)
chip antibody
H3K79me2
cell type
Leukemic bone marrow cells, primary
disease state
MLL-AF6 positive leukemia

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
13245572
Reads aligned (%)
98.3
Duplicates removed (%)
9.5
Number of peaks
1477 (qval < 1E-05)

mm9

Number of total reads
13245572
Reads aligned (%)
98.2
Duplicates removed (%)
9.6
Number of peaks
1486 (qval < 1E-05)

Base call quality data from DBCLS SRA