SRX209931
GSM1053514: Abrupt; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ab

Cell type

Cell type Class
Larvae
Cell type
Eye-antennal discs
NA
NA

Attributes by original data submitter

Sample

source_name
Eye/antennal imaginal discs [ChIP]
tissue
Eye/antennal imaginal discs
antibody
anti-Abrupt (a polyclonal rabbit antibody from Steven Crews)
strain
UAS-ab55 (Cook et al. 2004)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
12127490
Reads aligned (%)
88.4
Duplicates removed (%)
23.7
Number of peaks
5801 (qval < 1E-05)

dm3

Number of total reads
12127490
Reads aligned (%)
88.7
Duplicates removed (%)
21.9
Number of peaks
4680 (qval < 1E-05)

Base call quality data from DBCLS SRA