SRX209463
GSM1051165: mouse thymus; Mus musculus; Bisulfite-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Bisulfite-Seq
Antigen
Bisulfite-Seq

Cell type

Cell type Class
Blood
Cell type
Thymus
NA
NA

Attributes by original data submitter

Sample

source_name
mouse thymus
strain
C57BL/6
tissue
thymus
developmental stage
adult

Sequenced DNA Library

library_strategy
Bisulfite-Seq
library_source
GENOMIC
library_selection
RANDOM

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
537918216
Reads aligned (%)
81.8
Coverage rate (×)
7.2
Number of hyper MRs
234161 (qval < 1E-05)

mm9

Number of total reads
537918216
Reads aligned (%)
82.9
Coverage rate (×)
7.2
Number of hyper MRs
233701 (qval < 1E-05)

Base call quality data from DBCLS SRA