Antigen

Antigen Class

Histone

Antigen

H3K27me3

Cell type

Cell type Class

Neural

Cell type

Nucleus Accumbens

MeSH Description

Collection of pleomorphic cells in the caudal part of the anterior horn of the LATERAL VENTRICLE, in the region of the OLFACTORY TUBERCLE, lying between the head of the CAUDATE NUCLEUS and the ANTERIOR PERFORATED SUBSTANCE. It is part of the so-called VENTRAL STRIATUM, a composite structure considered part of the BASAL GANGLIA.

Sample

source_name

NAc dissection from 3-5 animals

tissue

nucleus accumbens

strain

C57BL/6

chip antibody

H3K27me3

treatment

Repeated saline I.P. injection for 1w as control

chip antibody vendor/catalog

Abcam Cat#ab6002

passages

N/A

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

219622381

Reads aligned (%)

88.0

Duplicates removed (%)

41.7

Number of peaks

14402 (qval < 1E-05)

mm9

Number of total reads

219622381

Reads aligned (%)

87.9

Duplicates removed (%)

41.7

Number of peaks

14467 (qval < 1E-05)