Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
Epithelial cells
cell type
Embryonic epithelial kidney cell
passage
5-8
cell line
HEK293T
enrichment
G9a Y1154A mediated H3K9 (E)-hex-2-en-5-ynylation

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
68140863
Reads aligned (%)
89.6
Duplicates removed (%)
1.8
Number of peaks
1375 (qval < 1E-05)

hg19

Number of total reads
68140863
Reads aligned (%)
88.9
Duplicates removed (%)
2.6
Number of peaks
710 (qval < 1E-05)

Base call quality data from DBCLS SRA