Antigen

Antigen Class

Histone

Antigen

H4K5ac

Cell type

Cell type Class

Neural

Cell type

Corpus Striatum

MeSH Description

Striped GRAY MATTER and WHITE MATTER consisting of the NEOSTRIATUM and paleostriatum (GLOBUS PALLIDUS). It is located in front of and lateral to the THALAMUS in each cerebral hemisphere. The gray substance is made up of the CAUDATE NUCLEUS and the lentiform nucleus (the latter consisting of the GLOBUS PALLIDUS and PUTAMEN). The WHITE MATTER is the INTERNAL CAPSULE.

Sample

source_name

Striatal Brain Tissue

tissue

Striatal Brain Tissue

group

Meth Saline

strain

Sprague-Dawley

treatment

METH pretreatment then saline treatment

chip antibody

Anti-acetyl-Histone H4 (Lys 5)- polyclonal antibody

chip antibody manufacturer

Millipore

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

rn6

Number of total reads

36957287

Reads aligned (%)

67.5

Duplicates removed (%)

58.7

Number of peaks

2927 (qval < 1E-05)