SRX208218
GSM1048216: RNAP-S5ph AurkB KO; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD43 negative mouse resting B cells
strain background
mixed
genotype/variation
Aurora B KO (Homozygous Rosa26-CreERT2/Aurkb flox)
developmental stage
adult
tissue
spleen
treated with
250 nM 4-hydroxytamoxifen for 48hrs

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
34919573
Reads aligned (%)
96.8
Duplicates removed (%)
12.3
Number of peaks
1770 (qval < 1E-05)

mm9

Number of total reads
34919573
Reads aligned (%)
96.6
Duplicates removed (%)
12.3
Number of peaks
1701 (qval < 1E-05)

Base call quality data from DBCLS SRA